rs248480985 SNP Detail

Summary

• ID
  rs248480985
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:105710837 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGTT TACACAGTGC TGTAGGTGTT
  A
  CCTGCGGACT GACGGATAAG ATCAA                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320863212	CHEV_3_105606439	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248480985					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:105710837 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13662	CpG island 13662	1719 bp distal
Rr582783	regulatory region 582783	1695 bp distal
Rr582784	regulatory region 582784	78 bp proximal
Tssr31081	transcription start site region 31081	70 bp upstream
Tssr31082	transcription start site region 31082	101 bp upstream
Tssr31083	transcription start site region 31083	399 bp upstream