rs248478140 SNP Detail

Summary

• ID
  rs248478140
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:111725122 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTCACTGGA CAATTCTGGC
  TTGCCAATGT GAACAGCAGT TGTTGGACTA GAGAAGAGAC CTTTATATCT ATGGCGTGGC
  CTCCTCTAAG CTAGCTTGTG AAGTGGAAAC TTAAGGGTTC TTTGGAAAGT AATAGATGGT
  GTTTTGCTGG GGAAAACACC TGAGGGAACA TTTCACTGAA GCAGACACAG GTGAAAGGAT
  R
  TTCTGCCAAA GCAAGCATGT AAAGGACACA TGATGAAGGA TTCTTTGCTA ACCACATGCA
  TAAATTGGTC AGCCTTATTT TGCATAGTTG AGCTGCATTT GTCAGGACTC CATAGAGAGA
  AATCTCACCA GAAAACCTTC TGGCTGTGTG CTGGTGGCTT CTTGCCACTT CTGCAGACTC
  AGAAGTCTGA GTGGTGTCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321263057	CHEV_4_111540530	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248478140					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:111725122 () rs orientation: forward

Symbol	Name	Function Class
Rr597504	regulatory region 597504	859 bp distal
Rr597505	regulatory region 597505	62 bp proximal