rs248423993 SNP Detail

Summary

• ID
  rs248423993
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52787507 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGGTGAAC TTTAAATCTG
  GCAGGGACAA GCCAACAGCT CTGTGTCTCA GCAGCAGGTG CTGTCTGTCT GCTCCCCTCC
  ACTGAGCATA CTGAGCATGC GCTAGGCTAT TTTGACAAGT CACTCATTTC TCCCTGAATT
  ATAGCTGACT CTGGAAACAT GCTCAGTCGT GGATATGAAC AGAAAAGAAC AGACTCCTTC
  R
  GGTAATTTTT AAAAACATTT CAATAAGCCC CCCTCATCAA ATGGGTTTTT AGAAAGTCGT
  GTCTCTTGAG TCTGCCTCTT CCAAGAGGGG CTACAAGTTT TTCCATGATA AACATGCCCC
  GCTCAGGGCA GAGACCTAGA GGAACTTGCC TCTCTTGTGA TCCTGGGAAT TTTATTTATT
  CATTACTAAT TTACATCAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320765669	CHEV_3_52684008	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248423993					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52787507 () rs orientation: forward

Symbol	Name	Function Class
Rr576595	regulatory region 576595	1268 bp distal
Rr576596	regulatory region 576596	60 bp distal
Rr576597	regulatory region 576597	1989 bp proximal