rs248404674 SNP Detail

Summary

• ID
  rs248404674
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:58490456 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gaagaactg tattaaaggg tcagagaact
  aggaaggttg agactcgctg CTTTAGGACA AAACTCAAAG GTATACGAAA CCCTGCTGTG
  TAGAGAAACC CTAAAGGAGC CTTGAATTCC ACAGCCATAG ACGGCCTCAC AGGCCTTTAG
  R
  TAATTGGTCT TCAGCTGGTG GTGCTATTTT GGAGAGACTC TTAGGGACGT GAGACTTAGC
  TGGCTCACAT AGGGGTGGGG CTCACATAGG ACTGGAGCTC ACATAGGGGT GGGGCTCACA
  TAGGGGTGGG GCTCACATAG GGGTGGGGCC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321138268	CHEV_4_58503328	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248404674					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:58490456 () rs orientation: forward

Symbol	Name	Function Class
Lpar1	lysophosphatidic acid receptor 1	Intron
Rr592898	regulatory region 592898	within coordinates