rs248239249 SNP Detail

Summary

• ID
  rs248239249
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:82463382 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTCCTCAA TCTCTCTTCA
  CCTTATTTTT GAGACAGTGG CTCATACTAA ATAGAGAGCT CATGCATGGT CTACAGTGGC
  TGCCCAGGGG ATTCTGGGGA TCCTCCCGTC TCTCCCCTTA CTCCCAGCAC CAAGATTAAA
  GACACATCAG CACAGGAGAC CTTTATGTAG GTACTGGGAA TCCAGATTAG GTCCCCAGGC
  W
  TTCATGGCAG TACTTTGTCA ACTGAACTCT TCCCTCAGAC CCTCAGTGAG ACTTTGGGGG
  TGAGTGGAAC ACTTTGGCTT AAAAGCGGTA TGTTTGTGTG TCAAGCTGAT AAAGGGTTAA
  GTGTTATGTT TAGCTCTAAC TGTCAATTTG ACATAAACTC TAATCGCACG GGAATACAGT
  TCCAATAAGG GATGGTGTAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321185799	CHEV_4_82191049	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248239249					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:82463382 () rs orientation: forward

Symbol	Name	Function Class
Gm11266	predicted gene 11266	within coordinates
Rr594371	regulatory region 594371	1795 bp distal