rs248229065 SNP Detail

Summary

• ID
  rs248229065
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:38841001 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGAGAAAA AGCAGAAAAT
  GACTCATTAA ATTTAAACAA CAGAATCCAA GTCCGTGCTG AGTTCAGATG TGGGAAAGGG
  GAGAGAAACC TCTTGCCAGT GTCCTGAGAA GTGAAGCACG AGCAAATGTC TGCCCATTCG
  GAAGAGAGCT GATGACAGAC CAGAGTCCTG ATAACCCTGA AGTCCAACTC CGGGAACCAA
  Y
  GAGTTTGTTG GGTGACATAC AAAAAGCATG GACAAGAAGT TCTTACAGTT CTCTGACAAC
  TCAAAGGCAG CATCATTGAA AGCCCAGCAT GGGTGATGAC AGCCACAAAG CTTCAACCCT
  GGCACTCTCC ACGCAGCTTG TAGCAGGTTA ATGGATGGTT GTGGAGTCTC AGCTCAGCAG
  CAGCCTTTAT TGCTTACAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320723041	CHEV_3_38685774	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248229065					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:38841001 () rs orientation: forward

Symbol	Name	Function Class
Rr575703	regulatory region 575703	1984 bp proximal