rs248159195 SNP Detail

Summary

• ID
  rs248159195
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147900504 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGAGTTTAA ATTTTTAATT AAGGAAAATG
  TTCAGGTAGA GACAGaagat aaagaacgct aataagccgg gcgaatttct gagttcgagg
  ccagcctggt ctacagagtg aattccagga cagccgagac tacacagaga aaccctgtct
  K
  gaaaCACCCC CCCCAAAAAA AGATGGTATT CTATTAATTA TCTAGGATAT AGAATAAATC
  TGCAgggctg gtgagatggc tcagtgggta agagcacccg actgctcttc cgaaggtcca
  gagttcaaat cccagcaacc acatggtggc                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321414961	CHEV_4_147190156	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248159195					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147900504 () rs orientation: forward

Symbol	Name	Function Class
Rr398848	regulatory region 398848	1241 bp downstream
Rr604504	regulatory region 604504	1019 bp distal
Rr604505	regulatory region 604505	1276 bp distal
Tssr44549	transcription start site region 44549	1372 bp upstream