rs248047801 SNP Detail

Summary

• ID
  rs248047801
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141867154 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTACACAC AGGGTGGCAT
  TAGGTGTCCC TGCTTGCTCT CTCTCTCTGC CTCTGGGGCC AGGTTGGGAG GGAAGAGGTG
  ACCTGGTGGG GGCTTTTTGG CTTGTTTTTT AGAGACTTTG GACACAAGAT CCTATACATT
  CCAGATGTTC CATCAAGCAC TGAAAACTCA CTTTTCAAGA GTGGAGAATG TTTCCGTTAG
  T
  GGGAGCACTG CAGTGGCCAC AAGGGATGAG GGATGAGTTG TTAGTGGTTT AGGATCAGTT
  AGAGGGGACG GGGAGGGAAA GAAAGAGGAA ACTGAGTTCC GGGGAGTAGG GCAGTAAGCA
  CTGACTGGAA ACTTGTGGGT TCTCCAGGCC CCAGTGCAGC CCCGTGGGGA CAGTGATGCC
  CCACAAACAG GCACAGGTAC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321393061	CHEV_4_141695758	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248047801					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141867154 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Kazn	kazrin, periplakin interacting protein			Intron
				mRNA-UTR
				Noncoding-Transcript-Variant
Rr377314	regulatory region 377314			540 bp downstream
Rr604004	regulatory region 604004			693 bp distal