rs247951408 SNP Detail

Summary

• ID
  rs247951408
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:163380375 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGTCTCAAC AGGTACCTTC TTCTATTCTT
  ATTTTGAAAC ACAGCAATGC AGCAAGGACA TCAGATGAAA GGCTTAAGCA AATGAGGTAA
  AATAGTAAAC AAGAATAATC ATAACTACAC ACACTGCCAT AGCGACAGGT GTGCAGAGAA
  R
  ATTACAATGC ATGTCCTAGG AATTAGTTCC AGGTCATTTC ATCCTTGACC TGGAAGCCAA
  TATGCTGTTG CCAATAATAA CAGCAATAGC CATTGGTGCC TGGAATTAGA GCTGTCCACA
  AACTGGAGAT GGAGCCAGGT GTGGTGCAAA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320603591	CHEV_2_163364191	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247951408					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:163380375 () rs orientation: forward

Symbol	Name	Function Class
Hnf4a	hepatic nuclear factor 4, alpha	Intron
Hnf4aos	hepatic nuclear factor 4 alpha, opposite strand	within coordinates
Rr569404	regulatory region 569404	792 bp proximal
Rr569405	regulatory region 569405	1773 bp proximal