rs247874943 SNP Detail

Summary

• ID
  rs247874943
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:149053776 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCATTTTCT CTTTTCCTTT TATTTTTAAC
  CAGAATGTTT TTCAGTGTAA GCTCTACGCA GTGCTTATCT TCAGGGATGA ACTTATTACC
  CTCGAAAGTT CAGAACACGT AGGTAGGCTC TCATCGGTAG ATACTTGCTG AAAGTAAGAT
  Y
  ACTTCTGTTT TATTTTAGCA AAAAAAAAAA GCAAGCTGCT AATGTTTACA TTATTCATTC
  ATTTCATCAT TCCGCATATA GTTATTGATG ACTTTATTCT GTGCATAGCT AAATAAGATA
  AGGTCTCTTG GAAAAGCTCA TAGCTTAAAA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321018540	CHEV_3_149011103	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247874943					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:149053776 () rs orientation: forward

Symbol	Name	Function Class
Gm30382	predicted gene, 30382	within coordinates
Rr587309	regulatory region 587309	578 bp distal
Rr587310	regulatory region 587310	547 bp distal
Rr587311	regulatory region 587311	345 bp proximal
Rr587312	regulatory region 587312	981 bp proximal
Rr587313	regulatory region 587313	1455 bp proximal