rs247795507 SNP Detail

Summary

• ID
  rs247795507
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:116482860 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATCT TAGAGCAGCT GGCCAGGCAG
  M
  GGTGGGGCAC ACCTTTAATC CCAGC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321277615	CHEV_4_116298268	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247795507					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:116482860 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
A430091L06Rik	RIKEN cDNA A430091L06 gene			1180 bp upstream
Cpgi14636	CpG island 14636			1049 bp proximal
Nasp	nuclear autoantigenic sperm protein (histone-binding)			Intron
				Noncoding-Transcript-Variant
Rr398403	regulatory region 398403			1036 bp upstream
Rr398404	regulatory region 398404			1731 bp upstream
Rr597936	regulatory region 597936			706 bp proximal
Rr597937	regulatory region 597937			1103 bp proximal
Rr597938	regulatory region 597938			1805 bp proximal
Tssr42894	transcription start site region 42894			1704 bp downstream
Tssr42895	transcription start site region 42895			1823 bp downstream