rs247738612 SNP Detail

Summary

• ID
  rs247738612
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152069281 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttttttttt ggatttattt atttattata
  tgtaagtaca ctgtagctgt cttcagacac accagaagag ggcatccgat ttcattacag
  atggttggtt gctggaattt gaactcagga ccttcggaag agcagtcagt gctcttaacc
  T
  ctgagccatc tctccagccc cCACACCTGG Ctttcttgtt ctgagacaaa gtctcctgta
  cctcagacta gccttagacc ccaaggttga ctgaatattt gatcttcctg cctccacctc
  tggagagcca ggattgcaca cagccatggc                                 
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321433805	CHEV_4_151358933	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247738612					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152069281 () rs orientation: forward

Symbol	Name	Function Class
Rr605694	regulatory region 605694	381 bp distal
Rr605695	regulatory region 605695	348 bp distal
Rr605696	regulatory region 605696	1051 bp proximal
Rr605697	regulatory region 605697	1246 bp proximal
Rr605698	regulatory region 605698	1910 bp proximal
Thap3	THAP domain containing, apoptosis associated protein 3	Intron