rs247609029 SNP Detail

Summary

• ID
  rs247609029
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:86785767 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGTGAGACT CCATTGAGCA TTGCCCTGGT CAGATTTTCC
  ATGATGGAAA CTACTCCATT AAATCCAGTT TTCTCACTGA GAAGACTCCA GTTAGCTCCC
  W
  CACACACACA CACACACACA CACACACACA CACACACACA CACACACACA CAGACACACA
  CACACACACC CGAGAGGGAT GAGATCTAAT GGAGTTTAC                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321847375	CHEV_6_86758779	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247609029					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86785767 () rs orientation: forward

Symbol	Name	Function Class
Rr633520	regulatory region 633520	1862 bp distal
Rr633522	regulatory region 633522	523 bp distal
Rr633523	regulatory region 633523	1027 bp proximal