rs247569957 SNP Detail

Summary

• ID
  rs247569957
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115834265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTGATTGT CAATCTCTGG
  TCATTGCATT TTGTTAAAAT GTATCAAAAT GCCACACTGT GCTTCATAAA TATGTACAAC
  TACATGCCAA GTTTAAAAGT ACACAACACA GGTGAACATA TGTGTGTGTG TAGAGAGAGA
  GAGAGAGCAT GAAAATAACC CAAATTTCTA TTATTTATTA AAGGATAAAC ACAGCTAACT
  W
  CTGATATTTG CACCAGCAAG ACTGAATCTA CAAAGCATTA GGTTAAAGAA ACGAGGGCAG
  GCACAAAGAA CTACATACCA TGACTCCTGC ACATGACATT TTAGAACATA TGACACTATT
  AGAACAGAAA GCAAGTCAGT GCTCACCTGG TCCTGAAGAT GGACTTGACT ACAAATGTGT
  GCAGGGAAAC CATGGGAAAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320894121	CHEV_3_115743534	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247569957					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115834265 () rs orientation: forward

Symbol	Name	Function Class
Rr583646	regulatory region 583646	348 bp proximal