rs247508446 SNP Detail

Summary

• ID
  rs247508446
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:62578293 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCACAGTAC AGGCACGGGC AGCTTTGCCA
  CGTGGATGCA TTCCTTCAGT GAGAACCCTG CAGGGAGCAT GCGCTTTGGA GAGGGCAGGG
  GGGTCCCGCC GAGCTTAGAC TCCCCTAAAC AGACACATCT TACGAACAAA ACAGTAAAGG
  Y
  TTCTGAAGCA TTAGGTGACT GAACCTGTGG TGGCTCAGCT GGTGAGAGAC CCAGTCCTTT
  GTCCTGTGTG GATGCAAAGG TGTTTTGAGG GACAGAAGGA AGAAAAGTCA CCCATGAGCC
  TCCAGGAGAG GCAGGAGACA ATGATGGCTG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321142888	CHEV_4_62321090	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247508446					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:62578293 () rs orientation: forward

Symbol	Name	Function Class
Gm52741	predicted gene, 52741	201 bp downstream
Rgs3	regulator of G-protein signaling 3	Intron
Rr398306	regulatory region 398306	1457 bp upstream
Rr593377	regulatory region 593377	within coordinates
Rr593378	regulatory region 593378	1566 bp proximal