rs247499690 SNP Detail

Summary

• ID
  rs247499690
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:114705726 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATCCTGAAG TGAGTCCCTC ACTTCAGGTG
  GCTGGTAAGT CCATTCCCTT TCTGGCCTCT GTGGGCATCA GACATAATAC ACATACaaaa
  ataataatta ataattaatC AGACAAAATA ATTAATCTTG AAGGAAGGAA GGAAGGAaga
  R
  agagagagag agagagagag aaagagaaag aaagaaagaa agaaagaaag aaagaaagaa
  agaaagaaag aaagaaaagg gagggaggga gggagagaga gagagagaga gagagagaga
  gagagagaga gagagagaga gGCAGAAAAC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321914674	CHEV_6_114678783	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247499690					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:114705726 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Atg7	autophagy related 7			Intron
				Noncoding-Transcript-Variant
Gm52917	predicted gene, 52917			1254 bp downstream
Rr636822	regulatory region 636822			1702 bp distal