rs247230654 SNP Detail

Summary

• ID
  rs247230654
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52813740 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCCCTTGC CAACCCTTGT
  GGAAGCAACA TGCCTAACAA CTGTCTCCTT TAGTGTCTGG AACTCCACAG GGCAGGGACC
  TTCCATGCAT TCTCGCTCTT CCTAACCTGA CACTGCGCTT TAACTTAGGA ATAATAGCTT
  AGTCAAAATG TGCCTTCATG AGTGAACTGG CTGTTCCTAT CAGTTCACAT GGAGCACTGA
  R
  CCTGGCCACC GGCTCTTGAG TTTGTGACCC GATGCCTCTA CTATCATATG CTTTTTGTAG
  TGCTTCATGT TCCAGACTAT AAAGACTGGA AAAGCACAGA ACCACGTTAC CCTAACATTT
  TCTGTGGATT TCCTTCCTTC CTTCCTTCCT TCCTTCCTTC CTTCCTTCCT TCCTTCCTTC
  CTCCCTCCCT CCCTCCCTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320765866	CHEV_3_52710241	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247230654					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52813740 () rs orientation: forward

Symbol	Name	Function Class
Gm20750	predicted gene, 20750	437 bp downstream
Rr576600	regulatory region 576600	946 bp proximal
Rr576601	regulatory region 576601	1035 bp proximal