rs247221846 SNP Detail

Summary

• ID
  rs247221846
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:22038673 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATAA ATTTCAGCTT CTAAAAATAC
  Y
  GTGTTCTTCC CCAGCTAGCT TCTTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320683711	CHEV_3_21883431	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247221846					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:22038673 () rs orientation: forward

Symbol	Name	Function Class
Rr574178	regulatory region 574178	1169 bp distal
Rr574179	regulatory region 574179	18 bp distal
Rr574180	regulatory region 574180	246 bp distal
Rr574181	regulatory region 574181	119 bp proximal
Rr574182	regulatory region 574182	1552 bp proximal