rs247054717 SNP Detail

Summary

• ID
  rs247054717
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:134876920 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGAC AGTTGGCGTG ATAGAGCGTC
  Y
  TTCTGGAGCA GTCCTGTGCC AAGCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321351023	CHEV_4_134705524	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247054717					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134876920 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15061	CpG island 15061	814 bp proximal
Cpgi15062	CpG island 15062	1669 bp proximal
Rr601932	regulatory region 601932	within coordinates
Rr601933	regulatory region 601933	1007 bp proximal
Runx3	runt related transcription factor 3	Intron