rs246938445 SNP Detail

Summary

• ID
  rs246938445
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:76385941 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTGTTGTTG TGAGCTGCTT
  TGTGGGTGCT GGGAATCAAA CCTGTGTCCT CTGTAAGAAA AACAGCCGAG CCATGTCTCT
  AGCCCCCATG GAATTATTTG TAATACTTTT GAAGTTTGGT TTCAAATGTT TTACATTGAA
  ATATACACAA GACTCTCACA AACATATTTG TGTCAACTCC CAGTTCTCTT TGGTATTACA
  W
  TGATGGCTTT GAAGTTTAAG TTCTAGAACT TTCAGAAGTA TGACTGTCTT TTAATGTCTG
  GAAAAAAAAG TGCTCACGGC CTCTAATCTT GTTCTCATTC TTGCACACTA GAAATATAAC
  TTTCACAACT GTGTTGTAGA TGTCTTGGCT ATTAGTATAA TGTCTTCCTC CCTTGGCCCG
  TTTTCTTTGG GGTTCTAACG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320355373	CHEV_2_76393654	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246938445					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:76385941 () rs orientation: forward

Symbol	Name	Function Class
Osbpl6	oxysterol binding protein-like 6	Intron
Rr559696	regulatory region 559696	651 bp proximal