rs246851878 SNP Detail

Summary

• ID
  rs246851878
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107589347 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tacttacaa atggtcctgt actgagtgtt
  ccaggaatga caatcagacc tttgtttaaa aagctgttta tagtcatctt gtaaccctac
  ctttgtttca aaatgttata agaccacctg tgactatctt ataatgacta cctgttatta
  Y
  gactaccttg ttaagccacc ttgcagtgtg actttgtttc aggagtctgt gtaggactaa
  tttgttatgc acgtgttctg ctcctataaa tccacctaat ttgtccacca catctcctac
  ttgggaaccc cccacctctg agctataaaa                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250548	CHEV_4_107404755	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246851878					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107589347 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	within coordinates
D4Mit43	DNA segment, Chr 4, Massachusetts Institute of Technology 43	1321 bp proximal
Gm70287	predicted gene, 70287	within coordinates
Rr747	regulatory region 747	1176 bp proximal
Rr597051	regulatory region 597051	344 bp distal
Rr597052	regulatory region 597052	56 bp proximal
Rr597053	regulatory region 597053	1611 bp proximal