rs246795256 SNP Detail

Summary

• ID
  rs246795256
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:118455669 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAACAGTTC TCATCTTTTA GATCTGTCTC
  Tgctggacgg ggtggcacac acctgtaaac ccagcatcct ggaggctgag gcaggagttt
  caacagctcc aaactagtct ggagctccaa ggccagatcG ACACCCCACC CCCAATCTGT
  Y
  TTACTTCTAT TCCCTTAGAG GGTGAGTGTA TATAATTCCC AGATTCTCAG GAAAATTTAA
  TACTGAAAGA CCTTTTTTTA AAAAGCAATA CTGTACTTCC AAATAACTGT TCAACAGTCT
  AACAAAGGAT AGCTGAGGGA TATGGGGAGG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321924615	CHEV_6_118428726	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246795256					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:118455669 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17903	CpG island 17903	256 bp proximal
Rr637483	regulatory region 637483	387 bp distal
Rr637484	regulatory region 637484	within coordinates
Rr637485	regulatory region 637485	602 bp proximal
Rr637486	regulatory region 637486	1801 bp proximal
Rr637487	regulatory region 637487	1962 bp proximal
Tssr62662	transcription start site region 62662	529 bp downstream
Zfp9	zinc finger protein 9	Intron