rs246742093 SNP Detail

Summary

• ID
  rs246742093
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:78875205 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATGCACAC AGAGACACAT
  ATATACATAC ATACATGCTA AAAAATAAAA CAAGATTTTT TCCCACTGTA CTAACTCCTA
  TGCATACTAG TTAGTGACAA ACTAAATACG ACAGACATTG GTTACTTTTG AAGGCGTCAG
  AGTTGAAGTC TCCAGTTGTA AGAATAATGA CACTTAAACT TTTGAATTCT AATCCTTTTC
  R
  TACTCACGTA TGAAGGCAGA ATTTCCAAAT AATGTTGTAG GCCTGACATG CATTATAATG
  TATGATGTTT TACAAATAAA TTCCAGTCTA AAACTACTGA AATACCAGGA GAAGAACTAG
  ATCTTAGCTT CTTCTAACAA TGTGTCATAC TACAAAGTGA ATTTCAAATG GTTAGTCATT
  CAAAAGGGGG TGGTAAAAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321832851	CHEV_6_78848216	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246742093					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:78875205 () rs orientation: forward

Symbol	Name	Function Class
Rr632520	regulatory region 632520	1830 bp proximal
Rr632521	regulatory region 632521	1913 bp proximal