rs246738079 SNP Detail

Summary

• ID
  rs246738079
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138112450 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTGGGACT TCTATATCCT
  ATGGCTGCGT GGGTATCCTA TAGTCATGTG TCATACAGGC CCTGAAACCC TTTAACAATC
  TCCCTTTTCC AAAATTGCCA TTTGATGATA ACTGGAATGG TAGGTGGGGC TGGACCCTCT
  TAGACATAGG AGACAGAAAG CCTAACTCAT ACTGATCTGG GAGGGGTAGG GTTGGGGGAA
  W
  TGCAACTTAT TGTCTTAAGG ACAGAGTACT CAGGACTTGA ACGGGGTTGG TGAGAACCAG
  GTTTGCCAGG GGACTTGGTA TTGCTTCCTC AATCTCCCCT CTTCTTAGCA AAGGCACTCC
  CTTCCACCCT CTCAACAACT CTAGCAGGAA GTGAGCATCT CTTTCCCCAA CAGTTCCAAC
  AAAAGTCCAG GGACTAAGCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321372998	CHEV_4_137941054	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246738079					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138112450 () rs orientation: forward

Symbol	Name	Function Class
Rr602904	regulatory region 602904	958 bp distal