rs246723738 SNP Detail

Summary

• ID
  rs246723738
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:115154764 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAAACTGG GCAAAGCTAC
  CGAAAGTTGT GTCGATTAGA TGGTGGGAAG TTAGGATGCA TCCATCTGGT GACTTCTATT
  TTCTCTGTTT AGTAGGCGGG TGGGTCAACA CAGAGAAAGA GAAGGATGAT GAAGGGGAGC
  TATTTGAGGG AAAGGAAAGA TTTGAAATGA TTATCTTTTG ACCAGACAAA CTTGACTTGC
  Y
  GTGTGTTGGG CCTTCGTGAT GTGACAGTCT GCTCTGTTAT GCTTCTTTTT TCTTCCTGGC
  ATTTTAGCAT CTTGGAGATG CAGAAGGTGA ACAAATACTC GAGCTGACCA ACATTTATTT
  TAGTTTTCTA ACAGATGACA GAAGAGAACG AAAGGAGATT TAGATAATTG AAATCCTAGA
  TCACCGAGTT CTAAGATGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321915421	CHEV_6_115127821	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246723738					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:115154764 () rs orientation: forward

Symbol	Name	Function Class
Rr636932	regulatory region 636932	1114 bp proximal
Syn2	synapsin II	Intron