rs246709068 SNP Detail

Summary

• ID
  rs246709068
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152517216 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGACTCTT GCTTGCTCTG
  GACATAGGAA CCTGAGTAGT AATGCCAATC AGGGTCTGCT GTAGTCCAGC TGTAGGCCGG
  AGGAAACTGG GCACAGCTCT TCTTTTTCCT CTGGCACTTC CTCCATGGAA GAATGTGCCA
  GGGGCAGGCA AGCCCTGCTA GAGGACCAGG ATGGAGAGCA CGTGAACCCA TCTGCAGTAC
  G
  GAGACAAAAT AGGTCCCCCG CATAGCCAGG AGATCCCACA GACACAAGCA GGAAAGAAAT
  GTCAATCTCC AGATGATGCC AGGTTTGGGG CTGTGTGTCA TACAAGGGAT TTTCTTCCCT
  TATTGATCCA AGAGTCGTTC AACTGGTAAC CACTTCTGCC TTCAAAGGGA CAGTGTTAAG
  TAATGCCAGG AGCTCTGTGA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321434661	CHEV_4_151806868	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246709068					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152517216 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Kcnab2	potassium voltage-gated channel, shaker-related subfamily, beta member 2			Intron
				Noncoding-Transcript-Variant
Rr605873	regulatory region 605873			150 bp distal
Rr605874	regulatory region 605874			270 bp distal
Rr605875	regulatory region 605875			223 bp distal