rs246641877 SNP Detail

Summary

• ID
  rs246641877
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52747572 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTGCCTGCA GAGAGCTGGA CTGTGGTTTG
  CTACTGTGGA CACTGACTTC ATTTGTTCTT ATTTCTTGTT CTCAAGACAG CCTATGAATG
  CAGACTTGCC TGGAATTTTG AAGTGCATAG ATTATTAAGG TAGGGAAGAG AAAATGTGGG
  W
  GTTAGAGGGG GACCACACCC AGGCAGCTGC CTAGGATACA GGCTCTGTAG TGTATTCTAG
  AAGTCCCTGG CAGAGCTCGG CCTCCAACAG AATTCTCCTC TGCCCTGAGA CCGCCCATCT
  TCTCCTTCCA GGTTGTCTCA GCAGAACTCA                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320765405	CHEV_3_52644073	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246641877					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52747572 () rs orientation: forward

Symbol	Name	Function Class
Gm65956	predicted gene, 65956	within coordinates
Gm65967	predicted gene, 65967	within coordinates
Rr576589	regulatory region 576589	10 bp proximal
Rr576590	regulatory region 576590	231 bp proximal