rs246422649 SNP Detail

Summary

• ID
  rs246422649
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34502414 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCAGGGTCT CGAGATGAAG
  ATATGTGCAT CGGAGCCTGG AGATCAACGC TGGGGTTCCT TGGGAGTCTT TCTCCCTTTC
  TTTTGTTGGG TTTTGTTGTT GCTCTTGAGA CAGACTCATT GAAACCTGCA GCTTGCTGGT
  TTTGCTGGGC TGCTGGCCAG GGGACCAAAA GACCAACCAG TCTCTGCCTT CCCTGGGCTC
  R
  GATTACAAAC ACATGCCACA ATACTTGGGG AGTTTGTGTT TTGTTTTGTT TTGTTTTGTT
  TTGTTGTTTT GTTTTGTCTT GTTTTGATAA CATGGATTTA GATCAAACTC AAGTCCTCAT
  GCCTACATTC GCCAAGTAGA CATCTTTCCA AATCCCTGGT CTTGACTTTG GTTGTTTAGT
  TTTCCAGTGT TTGGACCTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320701781	CHEV_3_34347187	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246422649					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34502414 () rs orientation: forward

Symbol	Name	Function Class
Gm64637	predicted gene, 64637	within coordinates
Gm64638	predicted gene, 64638	1655 bp upstream
Rr575135	regulatory region 575135	1459 bp distal