rs246401292 SNP Detail

Summary

• ID
  rs246401292
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101855173 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCAGCCTGG TCTACAAAGT
  GAGTTCCAGG ACAGCCAGGG CTATACAGAG AAACCCTGTC TCCAAAAACA AACAAACAAA
  CAAACAAACA AACAAACAAA ACAAAAAAGA AAGAAAGCCT AAATGGAAAG TCTAACTATT
  TATTCGTGGG AGAGAAATTT TGAAAAGATT AAATAAAAAA ACTTATATCC AGTTGGAACT
  R
  TAGAAGGCAT GAGACCCACA TTCTCATGGA TAAGCATTAG ATAAGCCAGA AATGTTAAAA
  TGCAGGTAGA AGGGTGTGCC ACCACGCCCG GCACTTAGCT TGATTTTTAA ATCAGGCAGA
  GCCAGCAGCC TAGGTGGGGT GGGGTGGGGC TACCCACAGT GGACTGGACT ATCCCACATC
  CATCATCATA TTTGATGCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321231985	CHEV_4_101670581	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246401292					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101855173 () rs orientation: forward

Symbol	Name	Function Class
Rr376932	regulatory region 376932	within coordinates
Rr596214	regulatory region 596214	477 bp proximal
Rr596215	regulatory region 596215	747 bp proximal