rs246381690 SNP Detail

Summary

• ID
  rs246381690
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:94485966 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCAAAAGG ATAGGGTTAT
  CCTAAATAGA ATGACCCAGT CAACAAGGAG CTTAGTGCCA GTGATGCCCG TGGCCCACCT
  GCAGAGACTG TGGCTATTAG TCTTAGCTTT GTCCAGGACA CTGATGCTTT AAGAAGAACC
  TCAAGGTGAT CCTCCTCTGT AGACAAGTTG GAGGACCTAT CAGCAGGAGC TGCAGAGGTG
  Y
  CTGCTCTGTG CTCATAGCTT TTCATAGTCA CCAGTTCTTG TGGCTTTTGT GGTTTCTCTC
  TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCGTAT TGCCACAAGG ATTCAGGCAG
  GTGTGACCTC ACTGGTGGTG TATGTGGGAC ATGTGCTGTT GTTATGCTCA TAGGACTGTT
  TTACCTTCTC CAGGGCATTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321868763	CHEV_6_94458979	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246381690					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:94485966 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr379776	regulatory region 379776			within coordinates
Rr634884	regulatory region 634884			within coordinates
Slc25a26	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26			Intron
				Noncoding-Transcript-Variant