rs246380758 SNP Detail

Summary

• ID
  rs246380758
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:129187150 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCCATCATC TCTCTTGCAG GGAACCACAC
  ACCGAGGCGA GTTTTCCTCT TCAGGAGTCA GAATCCCCGA AGGAGGCCAA GACCTTTAAC
  CCAGAGGCCA CTCTGTCTTT GGAGGGGACT GTGAACCTAG AGGACATTCT CTATCTGGGG
  R
  CATCGGGGGA CTTTGAAGAG AGTTTTTATG AGGAAGAATA TGAGAAGCCA GCACTGACAC
  TGTTTATCGA CGAATCGAGG CAGCCAGACG AGGCGCTGGG CCTAGAAGAG CCCGTGCGCC
  CAGAGGAGAT GCTGTCTGTG GAGGAATCCG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321311687	CHEV_4_128970601	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246380758					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129187150 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14888	CpG island 14888	46 bp proximal
Rr600195	regulatory region 600195	1867 bp proximal
Sync	syncoilin	Coding-NonSynonymous