rs246302492 SNP Detail

Summary

• ID
  rs246302492
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:69718004 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTCTGCCCC CTCTCTCTCC CCCCTCTCTC CCCCCTGTCT
  CCCCCTCTCC CCAAAAAACA AAAACAAAAA AGAATTTTAT GTGTATAGGT GTTTAGCCTG
  Y
  GTTATGTCTC TGTACCATTT GCATGCCTGG TGCCTGCAAA GTTCAGAAGA ATGCATTAGG
  TTCCCTGGAA CAGGAGTTGT AAGCTACCAC GTGGATACT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320332416	CHEV_2_69725717	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246302492					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:69718004 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11720	CpG island 11720	1671 bp distal
Mettl5os	methyltransferase 5, opposite strand	within coordinates
Rr558488	regulatory region 558488	1968 bp distal
Rr558490	regulatory region 558490	1457 bp distal