rs246281205 SNP Detail

Summary

• ID
  rs246281205
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:102708664 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGAGTAGTA TCCTTAGAGA CAACTAATGA
  GTGACTCAGA GAGTCTTGGC TGACTCACAG GTCTTGAGAA AGATATCAAA TGCCTGACTC
  AGTGGTTGTG CTTTGTACCA AACAAATCCT ACAAatatat atatgtatgt atgtatgtgt
  R
  tatatatata tatatatata tatagagaga gagagagaga gagagagaga gaCTGGCTTT
  AAAGTTTCAG TAGTCCCCCT GTCTCAGTCT CCCAACTGCT GAGATTATTG GGCTAAGTCA
  CCATGCCCAA CCATATCAGA TTTTTCTTTT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321235116	CHEV_4_102524072	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246281205					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:102708664 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm69082	predicted gene, 69082			within coordinates
Rr596317	regulatory region 596317			669 bp distal
Rr596318	regulatory region 596318			1726 bp proximal
Sgip1	SH3-domain GRB2-like (endophilin) interacting protein 1			Intron
				Noncoding-Transcript-Variant