rs246212386 SNP Detail

Summary

• ID
  rs246212386
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107559158 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCCAAATCA TCTGTCAATA
  GGAATTTATC TAACGATCAT CCACTCCAGT GTGAGAGGGG AGCTGGTTCT TCTCCCACAG
  ACTTCCTCTG GAAGGAAGGC CAGAAAGGGG CCACGAGGCA GGTAAGCTGC GCATGCGCGT
  GCTTGCTCGC TCTCTTGCTC ACGGAGTGCT TGCTAATGCG GGCTACTGGG CTCTCTACTT
  K
  AAGTTCATTA TCTCGTCTGT GCACACTCCC ACCTTGTGAC AGCCCTAAAA GGTAGTTATT
  GTGAACACAA ATTACAGGTC TACAGAAGAA AAAAGTAAAT AAACGCAGAA AGAAGCTAAA
  TAACACGTCT AAGGCCACAC AAATAGGGGG CAAAAAGTGG GACTCAGAAT TTATTTCTGT
  CCAAAGCTTC GTGACTTTTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250170	CHEV_4_107374566	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246212386					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107559158 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	within coordinates
Gm70287	predicted gene, 70287	within coordinates
Rr597043	regulatory region 597043	372 bp distal
Rr597044	regulatory region 597044	634 bp distal