rs246176392 SNP Detail

Summary

• ID
  rs246176392
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:143058695 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAATATCTT ATCTCAGAAT
  GGTCCATCTG TGCCTGGCAG CCCTATCTCA TCTCATGGTT AAATATTCAT GACAAAGGAA
  TGCAGAACAC TGACCACCTG TGACCCCCAA CCCCCAACCA ATGAAATTTT AGATTACCTA
  ATCCTTCTAG AGAGTTGCCT GCTTTCCTGC AAGAAGGCCT GCATACCTTT GTCTGGGGAC
  Y
  CATTTTGGAG AATGGTTGAC CCCCACATGC TTGTTGTTTC TGCAGAATAA ACATTCTCTG
  TCTTTGCATA TTATCTGAGT CTGGGGTCTT CCTTCAGCTG TTTTCGGGCC CTTACAATAT
  CATACCCACA GTCAAGAGCA GAAAAAAATT AAATGCATAC CACTCACATA ATTCAGGACT
  TCCTACCTAG GGAATGCTGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321404127	CHEV_4_142922028	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246176392					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:143058695 () rs orientation: forward

Symbol	Name	Function Class
Rr604198	regulatory region 604198	1126 bp distal