rs246141680 SNP Detail

Summary

• ID
  rs246141680
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152447923 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGACTAGT TGGAGCTGTA
  CCACACCGTG ATGTATCGCA ACTACCAAAG AAAGAATGAC ATGGACGAAC CGCCACCCTT
  TGATTACGGC TCTGGCGATG AGGATGGTAA GAGCGAGAAA CGGAAGAACA AGGACCCTCT
  CTACGCCAAG ATGGAGGAAC GCTTCTACCG CTACGGCATC AAGCCCGAGT GGATGATGGT
  C
  CACCGCATCC TGAACCACAG GTGAGGGTGT TGGGTAGCAC CTGCCGGGTG AGGGCTGTCC
  AGGCTTGCCT TTCAGAGCCA GGAGTAGGCT CAGTGGGGCA GGAGCCGAGT AAGGACATCT
  CACTGCAGGG GATGTGGCTG TCCAACCAGG AGTGTCACGC CTCTGCACAG GGGAACTGTC
  ATGCTCAACA TTCTCACTCT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321434323	CHEV_4_151737575	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246141680					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152447923 () rs orientation: forward

Symbol	Name	Function Class
Chd5	chromodomain helicase DNA binding protein 5	Coding-Synonymous
Rr605861	regulatory region 605861	1814 bp proximal