rs246083785 SNP Detail

Summary

• ID
  rs246083785
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141954823 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAGTTCTC CAATCTCCAA
  GAGGCTTTAG AAAGGTCTGT CAGACATCTG TCCCATGGCG TCTGCCTCAG TTTCCTCTAC
  TGTGCACTGA AGTCCCTTCT CTGAAGGGCT GGTTAAAACT CACTAGGACT TGTGCCTGGG
  AGAGAGAGGG AACGTTGCAG GTCAAGAGCG GAAAATTATC TCATGCATCT CTTGGTACCT
  C
  CAGGGGCCAT TTACACAGCG TGGCTCTGAC CTCGCGGGCT CATGAAGACT GTGTATTCAG
  AATGTATTGA CTTAGACCCT AGCTTCCACC AACCTCAAAG CTAAGTATGC TAGCAGAGAG
  CATCTCTGAG TACTCGCGCT GTTGTCACCT GCCTTCTTGA TGTCCCATGC ATGGACTTGC
  TACTTGCTTT GATTAATGAC                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321393945	CHEV_4_141783427	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246083785					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141954823 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Kazn	kazrin, periplakin interacting protein			Intron
				Noncoding-Transcript-Variant
Rr604034	regulatory region 604034			1110 bp distal
Rr604035	regulatory region 604035			1559 bp proximal