rs245943220 SNP Detail

Summary

• ID
  rs245943220
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:109237840 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTTTGAGA CAGGATCTAA
  TGAAATAGCC TTGGCTGGCC TGGAACTTGC TATGTAGACC AGGCTAGCCT TGAACTCAAG
  ACTCTTGAAG ACCACCTGCC TCTGCCTCCT CTGAGTGCTG GGTTTAAAGG TGTATACCAT
  CATACCAGGC TTTAAAAATC TGATTTAAAA ATTCTTTGTA GTCTAGGAAC AAATTGTTAT
  G
  TTTTAAACTG TTTTTTTGTT TGTTTGTTTG AGTCTTTGTT ATGTTTAGCA CTACCCTAAG
  GAAAGGTTTG TTTTTAATGC AAAATAAAGT AGCTGTGAAG GTAGCTTCCC TGAGTGTGGG
  CAGTGCTGCC ACGCTGCTCT GTGAGAAGAC ACAGTGTTGA TGGGCACTCT GGGTTTTTAT
  CCCTAGACCT TTCCTGGGTA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321253911	CHEV_4_109053248	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245943220					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:109237840 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Eps15	epidermal growth factor receptor pathway substrate 15			Intron
				Noncoding-Transcript-Variant
Rr597307	regulatory region 597307			1761 bp proximal