rs245925841 SNP Detail

Summary

• ID
  rs245925841
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:82462987 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGGGAGCC CAAATAAAAC
  ATGGCTGGGG GCTACAGTGA CCTTGGGATA TTGCATTGAA TTTTTTGTTC TAACTGCATT
  AAGATTTTCC ATCCCTAATA ATCACTGGGA AAGAATTTAT AGAACCCAGA ATTTTGCCAG
  GGATGGAAGG AAAACCACAG ATATGATTCT TTTAGATGAA CTAATGTGGC CCAGGCTGTT
  K
  TTGTTATTGT TTGGGTTTTG GGTTTTTTGT TTGTTTATTT GTTTGTTTTA GAGTTCAGCT
  CTAAGAACCT TACAAGTATC ATTTTATCGT TTCTTTTTTT TAAAATTGGA TTAATTTTTA
  ATCTCTGTGT GTAGGGTATG CATATCCATG TTTGTGTGTA GACACATGTA TATGTACAGG
  CCAGAGGTCA GGCGTCTTCC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321185796	CHEV_4_82190654	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245925841					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:82462987 () rs orientation: forward

Symbol	Name	Function Class
Gm11266	predicted gene 11266	within coordinates
Rr594371	regulatory region 594371	1400 bp distal