rs245921035 SNP Detail

Summary

• ID
  rs245921035
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52740202 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTCCTGTA AATTAGCGGC
  TCTAGCTGAC AGAGCTATGA GTGCTTTTGG AAAGCTTCTC TATCAGTGTC AAAATCAAAG
  GCAGAGGGCG CGGAGAAGGC TGGGTTTAGC AGGGTGGCAT TTTAGATGTG GATTTATCCA
  AATGAAGTGC ACACTTGCTT TTCCTGTCTA TCTTTGTAAG CCTTTGTTCT TTTTGTACTT
  C
  GAAGTATATC GGGGTTGGTA GTTTTAACAA AAGTCCCATG GAGAGGTCTT CTGGTAGGTA
  GACATACAAA GTTTGAGGTT TGGGGCCGAT TACATGATGT GGAAAAAAAC AGAACAGAAT
  TTATAAGTCA AAATCTGCCA CAAGGTAGTG TGGAAATTTG GGGAATCGAA TTAGTAATAA
  ATCCCAAGCC TTCCCCTTTG                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320765362	CHEV_3_52636703	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245921035					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52740202 () rs orientation: forward

Symbol	Name	Function Class
Rr576587	regulatory region 576587	454 bp distal