rs245899562 SNP Detail

Summary

• ID
  rs245899562
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:101296225 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTAAAATT ACCATTGCTT
  TGACTTGGAT TATTTTCAGT TTCATGCAAC CAAAAGTATT CTCATCAACA AAAGTGAATA
  TTGCTAATCT CATTGGATAG ATTGGGAAAC TAAAGCCCAG TGGAGTTAAG TAATTTGTCT
  CAAGTCACAC AGCAAGATCC TGTCAGAAAC ATCTGAACCA AAGTTCATTT TAGCACTTTA
  S
  TTTTTCTTAC AATTGAGGTG GCAAAAATTG CTGAGTCTTT GACACTGGGA AAATTTTTAT
  GAAGTAAGCA CTTTACTGTT TCAAGAGTAA ATTTGGGCTG GGCATGGTGG TGCACACCTT
  TAATCCCAGA AGAGGCGGGT AGATGTCAAA ATGTCAAAAC CAGCCTGTAC AAAGAAAGTT
  CAAGACTAGC CAGAGCTGTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320428383	CHEV_2_101306037	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245899562					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:101296225 () rs orientation: forward

Symbol	Name	Function Class
Rr561501	regulatory region 561501	1056 bp distal