rs245777387 SNP Detail

Summary

• ID
  rs245777387
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:72685724 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGGGTTGC TGCCATCTGC
  TGGGTCCCAT GGGTACCCAT TCACACATGT GTGTAGCCAC ATACAGAAAA TTTTAAATCT
  TAAAAACAAA CAAATCCTGG GCATGCTGAT GGGGGACTGT CACCCAGCAC TGGGGAAGCA
  GAAGCAGGAG AATCGAGTCT CAGCTACCTG GTGAGTTTGA CACCCGCCCC CCGCACCCCC
  T
  CCTCCCCCCC CCCCGCGGGC TTACAGGAGA CTCTGTTTCA AACCCAAAGA CCCAAATGAG
  GAGTAAAGGT GCTTAGGTGG GTCCTGGTAT GCAGCCAGAT TCCAAACATT GCTTTCATTC
  TCCAGTCCTC TACTAGAGCA GGTACCATAA GACCTCCTTG TGTGGAGGCT CAGTGGGTAA
  AGTACTTCCC ACTGCAAGTG                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	C57BL/6J	MA/MyJ	NZW/LacJ	SWR/J
ss378025700	MGP_WTSI_9_72626249	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	AKR/J	C57BL/6J	MA/MyJ	NZW/LacJ	SWR/J
rs245777387					SNP	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss378025700	MGP_WTSI_9_72626249	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:72685724 () rs orientation: forward

Symbol	Name	Function Class
Gm27204	predicted gene 27204	within coordinates
Gm68390	predicted gene, 68390	1841 bp downstream
Gm68819	predicted gene, 68819	1973 bp upstream
Rr682833	regulatory region 682833	523 bp proximal
Rr682834	regulatory region 682834	662 bp proximal
Rr682835	regulatory region 682835	1483 bp proximal
Rr682836	regulatory region 682836	1984 bp proximal