rs245763346 SNP Detail

Summary

• ID
  rs245763346
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr17:24010097 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAACAGGCT CACACTTAAC
  AAGGTACTTG GAATGGCTTT ACTCCTGGTG GGCAAAAAGG GTTGACAGAG TTAGTCCCCA
  AGGCTCAAGA AAGTGTCAGC ATGGATGGAG TCTGCACTGT TTGTCCTTCA CTTGTACTGC
  TGAGAGGCCA TCCCCACCCC CAAAGGCAGC CACATTGAGT TTTAAACCTC AGGATCCACA
  R
  GACCCATAAA CCAGTGCTCT GAAACCAGCC TGCTCCCAGT GGAAGGCCCA GCCTGACCTG
  CACTAATCAG GTGACATCCT TTAGGAGGAG CAAGAACAAA GCCTGAGGTT ACCAGTTCCT
  GCAGTGCAGA ACACTGTTCT CTGAGCATAA CGGCCTTAGC CATCTTTTTT TTTTTTTTTT
  AAGATTTCCT TTTTATCGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325327387	CHEV_17_23928090	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245763346					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24010097 () rs orientation: forward

Symbol	Name	Function Class
D930048G16Rik	RIKEN cDNA D930048G16 gene	within coordinates
Gm52285	predicted gene, 52285	within coordinates
Rr523147	regulatory region 523147	within coordinates
Srrm2	serine/arginine repetitive matrix 2	Intron
Tssr142954	transcription start site region 142954	453 bp downstream
Tssr146666	transcription start site region 146666	1210 bp upstream