rs245728736 SNP Detail

Summary

• ID
  rs245728736
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138109257 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCTCATCT TGTCTTTTTC
  TACTTTTTTT TTAATTAAAT GGACATCTTT TCTTTAAATT ACTTAAAAAT TGATCATTTT
  TCTGGGCCAG TAAGATGGCT TGGCAGGCAC ACGCATTTGT CTCAAAAAAA TCTGGTATCC
  TGAGCTTCGA TCCCTAGAAC CTCTGTGGAG TTGGAACGAG GGAACCAACT CCATAAAGCT
  R
  GTAGGCAGCC TCTTGCAGGC AGCCTCCTCC CCTGGTTCCA GGGCTTGGGT AGTAAGACTG
  GCTTGCTCTA CTACTGTCAG AGATTCCCCA GCACCAGGAA TTCATGTAGA TCAAGAATTG
  TACATAGACA CAAATTATAA ATAGTATATA TATATTCACA TATATATGTG TATTATGTTA
  TAGATTATAT TATAATATGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321372969	CHEV_4_137937861	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245728736					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138109257 () rs orientation: forward

Symbol	Name	Function Class
Rr602901	regulatory region 602901	1857 bp distal
Rr602902	regulatory region 602902	1457 bp distal
Rr602903	regulatory region 602903	704 bp proximal
Rr602904	regulatory region 602904	1774 bp proximal