rs245658817 SNP Detail

Summary

• ID
  rs245658817
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:83544981 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCAGCAGGA AAACTACTAC
  CAAGAGGGGA GATATGCCTG ATGTCATTAA GATGCCTGAA CCACGCTGGG AGGAAGGACA
  GACATGCCTT TTAAATCCCG AACTAAAGCA TCCATGAAAG GTCCAGAACA AGATTCTCAA
  GAGTGGGGGA GGCCGAAGGG TGGTGATGTA GATGCCTACC TCCAGGCCCC TCCCCCACAC
  Y
  CCCGCTGTAT GTAGTAACTG GTGAAGTGAG CCACTTGGTG TAACCTGGCA GGAAGACATC
  AAGTGAAAAC CAGTCTGAGC CCCACTGGGC TAGCACTTCT CAGCAGCCAC CCGCCTGTCA
  TTTCACAGGC TCAGAATCAG GGTCTGCAAT GCAGGTGCCA TGGCGGACAC TGAAGGTAAG
  ATAGCTGCAT CTCCTGCTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321844564	CHEV_6_83517993	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245658817					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83544981 () rs orientation: forward

Symbol	Name	Function Class
Gm21284	predicted gene, 21284	40 bp upstream
Rr632893	regulatory region 632893	971 bp proximal
Stambp	STAM binding protein	Intron