rs245380349 SNP Detail

Summary

• ID
  rs245380349
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:6214329 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACTGCTGG GCAGTGATTT
  GATGGGGAAA GCCAAAATAG AAAGATACAG AAGAAATAAA TTATTACATT TGAGTCACTA
  CAAAGACCCA GGAATTAGGA TAAGATCAGT AAATTGCTCT GGCTACATCT TTCCAGTCTG
  TCTACTTAAA CATTCCAGTG GTTTACTATA GCAAAATAGA ACACATCGAA TTCTCTCATA
  W
  CTGTTGGGTT CCCAAGCTCA CAGGCCAGTT TTGTGCTACT TCACTGGGGT GGGCTTTTCT
  TTCTCACAAG CTCCTCAAAT CCTTTACAAG TATGTTATTT CTACCCCTAG CTGAGATTTT
  TCCAGTCTAT CGCTCAGTGT TCAACTAACT GTCAACATGG CTTATTACAC TCCAAGGAAA
  AAGTAAGACA CACAGATTTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321731357	CHEV_6_6164329	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245380349					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:6214329 () rs orientation: forward

Symbol	Name	Function Class
Rr378879	regulatory region 378879	870 bp downstream
Rr626224	regulatory region 626224	1064 bp distal
Rr626225	regulatory region 626225	1873 bp proximal
Slc25a13	solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	Intron
Tssr59765	transcription start site region 59765	1021 bp downstream