rs245123017 SNP Detail

Summary

• ID
  rs245123017
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132737662 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAATA GACAAGTAGC AGGGCAGTGA
  C
  CACTGCATCA CTCATCTGTT TCTTC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321338136	CHEV_4_132566266	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245123017					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132737662 () rs orientation: forward

Symbol	Name	Function Class
Ahdc1	AT hook, DNA binding motif, containing 1	1135 bp upstream
Cpgi14982	CpG island 14982	428 bp proximal
Rr601151	regulatory region 601151	1768 bp distal
Rr601152	regulatory region 601152	336 bp distal
Rr601153	regulatory region 601153	1014 bp distal
Rr601154	regulatory region 601154	665 bp proximal
Rr601155	regulatory region 601155	1318 bp proximal
Rr601156	regulatory region 601156	1363 bp proximal
Rr601157	regulatory region 601157	1864 bp proximal
Tssr39436	transcription start site region 39436	1132 bp upstream
Tssr39437	transcription start site region 39437	1167 bp upstream
Tssr39438	transcription start site region 39438	1443 bp upstream