rs245087355 SNP Detail

Summary

• ID
  rs245087355
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:43905805 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCAAAACA CACAGTCGTC
  ATCTTTCTAC ACTTCTTGCT GAGTACAGTC TTCCCAGATA TAATCAAATA AAATCCAACA
  GATCCCCTCT TCCAAATCAT CTCCCATGGA TCACTAACTA TTATACCCTA AAGAGTTATC
  TACTGTCAGG TGTGGCGGTA CATACCTCAA TCCCAGGACT CAGGAGGCAA TGGCAGGGAG
  R
  TCTCTGTGAG TTTGTGGCTA GCCTGATATA CATAGTGAGT TCCAAGACAG CCAGGGCTAT
  GTAGAGAGAA ACCCTGTCTT AAAAAACAAT AAAGGAAGGG AAGGGAAGGG AAGGGAAGGG
  AAGGGAAGGG AAGGGAAGGG AAGGGAAGGG AAGGGAAGGG AAGGGAGATA GATTTAAAGT
  ATTACCTCCC TTTGGAGGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321099256	CHEV_4_43918677	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245087355					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:43905805 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm56265	predicted gene, 56265			651 bp downstream
Reck	reversion-inducing-cysteine-rich protein with kazal motifs			Intron
				Noncoding-Transcript-Variant
Rr591101	regulatory region 591101			1834 bp distal
Rr591102	regulatory region 591102			640 bp proximal
Rr591103	regulatory region 591103			855 bp proximal