rs245053553 SNP Detail

Summary

• ID
  rs245053553
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:86983634 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGGCTGGAA GATAACTCAC AACGGGGAAA
  TCTGTCTAAC TGCAAACAAA GAACGCATCC TTTGGGAAAG GTGGAGTCAG CTGAAGACAC
  CTCATTACAG CATTCTGAAG GCTTTGTCAT GAAAAGCAGC TTCAGGAAGT CCATGTTGGG
  R
  CTCCAGTGGG GCCTCCTGCT GTCCTAAGAC TTCTCAGGCT TGTCAGCAAA CAACCCTTCA
  TTGATGACAG GTTCACCAGG CAACCACAAT CTCACTTCTG TGCTGGGAGG TGTTTACTGT
  ACGCACTTCA TACACATTGC TACCACTAAT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321199708	CHEV_4_86711301	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245053553					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:86983634 () rs orientation: forward

Symbol	Name	Function Class
Rr594861	regulatory region 594861	within coordinates
Slc24a2	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	Intron