rs244957274 SNP Detail

Summary

• ID
  rs244957274
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:75846209 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATGAGCAA GTTTCTCCAC
  GGTCCCCTTT AGGGTGACAT GGCTTTTTTT TTTTTTTTAA GATTTCTTTA TTATGTATAT
  GGCATTCTGC CTACAAGTAT GCCTGCTGGC CAGAAGAGAG CACCAGATCT CATTATAGAT
  GATTATAAGC CACCATGTGG TTGCTGGGAT TTGAACTCAG GATCTCTAGA AGAGCAGGCA
  K
  TGCTCTTAAC CGCTGAGCCA TCTCTCCAGC CCTGACATGG CTTTTGATAG AAACAAACAA
  ACAAACAAAC AAACAATGGG GAGAAAATTT CATCAGAAGT AGGAATTGGG CAGCTGGAAA
  GTTGCCACGC TAATGCAAAG GTCGAAGCTG ACTGAAAAGG ACAGAATAAA TGTGCCGGTG
  TGTCACCTCA CCTGTGTGTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320352402	CHEV_2_75853922	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244957274					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:75846209 () rs orientation: forward

Symbol	Name	Function Class
Gm75271	predicted gene, 75271	within coordinates
Pde11a	phosphodiesterase 11A	Intron
Rr559634	regulatory region 559634	1030 bp proximal